BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032H06LP1|AL429644
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig197 1729 0.0
>3x_Contig197
Length = 1712
Score = 1729 bits (871), Expect = 0.0
Identities = 906/914 (99%), Gaps = 5/914 (0%)
Strand = Plus / Plus
Query: 1 gatcaacatttggatacgttaagtaagaaaaaacgaaaattgttatttgctgtttgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gatcaacatttggatacgttaagtaagaaaaaacgaaaattgttatttgctgtttgtatt 166
Query: 61 cgcgacccatggaaagtatcaaataaagatttgtttg-gtgattcgtctacaaaaattat 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 167 cgcgacccatggaaagtatcaaataaagatttgtttgcgtgattcgtctacaaaaattat 226
Query: 120 ccaacttcatccaagacaagagatcttcgatgcggacccattcaagacaggaaacgtata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ccaacttcatccaagacaagagatcttcgatgcggacccattcaagacaggaaacgtata 286
Query: 180 tttcaacactgttgggggaggtataggtattggtagctctcaacctatcatcaaagctaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tttcaacactgttgggggaggtataggtattggtagctctcaacctatcatcaaagctaa 346
Query: 240 cggtaaaaaatacttcccaggaaatgtttcacttactattgattcatctctcgagttcgg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cggtaaaaaatacttcccaggaaatgtttcacttactattgattcatctctcgagttcgc 406
Query: 300 --tatatttagacatttgggagcaggtgggagttttaagcctggccgtctaataagtgga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gctatatttagacatttgggagcaggtgggagttttaagcctggccgtctaataagtgga 466
Query: 358 cgtggagaagaacggaattcgttcgaataccgattcataatccaagatgtagaagtgtgg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cgtggagaagaacggaattcgttcgaataccgattcataatccaagatgtagaagtgtgg 526
Query: 418 ggatgcggaggagaaaaagagctcgaagacaa-gtaaagcaatggcaatgggaagaggcc 476
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 527 ggatgcggaggagaaaaagagctcgaagacaaagtaaagcaatggcaatgggaagaggcc 586
Query: 477 gaagccaaaagaaggcaaaagatcaacttacaaagcatgggagaagatcgtgcattattg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gaagccaaaagaaggcaaaagatcaacttacaaagcatgggagaagatcgtgcattattg 646
Query: 537 gaaatggcaggtcttgtagggcaacatcaaagcggtggatctatttaamatcgctaagta 596
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 647 gaaatggcaggtcttgtagggcaacatcaaagcggtggatctatttaacatcgctaagta 706
Query: 597 aatattaaatatttgamattgcatagaatttttaaattgatcatttcttgcttttcgtct 656
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aatattaaatatttgacattgcatagaatttttaaattgatcatttcttgcttttcgtct 766
Query: 657 tgttaatgagctttttcttaacgtgtttttttactttggtcttcctcttttcacgtttgg 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tgttaatgagctttttcttaacgtgtttttttactttggtcttcctcttttcacgtttgg 826
Query: 717 cctcttttgtttcttgcttacgttgttttttagcatctttatcttcgtac-ttttttcct 775
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 827 cctcttttgtttcttgcttacgttgttttttagcatctttatcttcgtactttttttcct 886
Query: 776 ttcagtggagtgtctttatcggagacccatccatcaccatcagaactatcgttagtttca 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 ttcagtggagtgtctttatcggagacccatccatcaccatcagaactatcgttagtttca 946
Query: 836 tcactatcatcatcttcatctgatccagctatgtcatcttcattgatatccgttacgagg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 tcactatcatcatcttcatctgatccagctatgtcatcttcattgatatccgttacgagg 1006
Query: 896 ttagggagatcatc 909
||||||||||||||
Sbjct: 1007 ttagggagatcatc 1020
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7992
Number of Sequences: 1807
Number of extensions: 7992
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)